chore(release): bump version to 1.6.3

Both controls already render as cards that light up when selected — the same
selected/unselected treatment LaneStripCard uses — so the tick box and the two
radio dots were a second indicator of a state the card was already showing.

Neither input is removed, only hidden (`sr-only`): they are still what a
keyboard toggles and what a screen reader announces, so the cards take a
`focus-within` ring in exchange for the focus ring that went with them.

The router radios needed one thing the checkbox did not. "AI Router" is
disabled until the profile list lands, and the greyed-out dot was the only
thing showing that; hidden, it would have read as a card you can click that
does nothing — the dead control the existing comment warns about. So disabled
is now its own branch: muted text, reduced opacity, no hover, not-allowed
cursor.

Layout follows: no flex row with a gap when there is one child left, and the
two equal-width router cards centre their label rather than leaving it hard
against an empty left edge.

Visual only. No behaviour, API or schema change.

CLAUDE.md

@@ -1,6 +1,6 @@
 # Claude Code Working Guide
 
-_Last synced: v1.6.0 (2026-09-14) + AI Router profiles (`server/lib/ai-routers.js`, `server/lib/router-apply.js`, the Settings tab `/settings?tool=ai-router`, and `lanes.router_profile`) + v1.5.6 (2026-09-11) + the systemd handover rule below (`scripts/systemd-service.js`'s `writeUserService`/`restartUserService` split and `plugin-bootstrap.js`'s deferred `pendingSystemdRestart`) + eb63569 (2026-09-10) + release-based update detection (`server/lib/update-check.js` reads the forge releases API — a checkout via its `origin` remote, a plugin-cache install via the marketplace manifest on disk, since an archive-sourced cache dir has no `.git`; a `plugin_managed` install self-updates via the detached `plugin-update` chain) + the install-wide **Update all** batch and session reload (`server/lib/cc-update-all.js`, `server/lib/cc-reload.js`)._ A change that makes any statement in this file, `AGENTS.md`, or a README wrong — a moved path, a new or changed extension point, a retired rule — updates that file in the same change-set and bumps this marker.
+_Last synced: v1.6.0 (2026-09-14) + AI Router profiles (`server/lib/ai-routers.js`, `server/lib/router-apply.js`, the Settings tab `/settings?tool=ai-router`, and `lanes.router_profile`) + the bootstrap's superseded-build guard and plugin-cache pruner (`supersededBy`/`pruneRetiredPluginRoots` in `scripts/plugin-bootstrap.js`, `unitRoot` in `scripts/systemd-service.js`) + v1.5.6 (2026-09-11) + the systemd handover rule below (`scripts/systemd-service.js`'s `writeUserService`/`restartUserService` split and `plugin-bootstrap.js`'s deferred `pendingSystemdRestart`) + eb63569 (2026-09-10) + release-based update detection (`server/lib/update-check.js` reads the forge releases API — a checkout via its `origin` remote, a plugin-cache install via the marketplace manifest on disk, since an archive-sourced cache dir has no `.git`; a `plugin_managed` install self-updates via the detached `plugin-update` chain) + the install-wide **Update all** batch and session reload (`server/lib/cc-update-all.js`, `server/lib/cc-reload.js`)._ A change that makes any statement in this file, `AGENTS.md`, or a README wrong — a moved path, a new or changed extension point, a retired rule — updates that file in the same change-set and bumps this marker.
 
 ## Project mission
 - Maintain a reliable local-first dashboard for Claude Code session monitoring.
@@ -45,6 +45,8 @@ See `docs/LANES.md` for full guide: stage reporting, custom templates, lane acti
 
 ## Non-negotiable engineering rules
 - **When a `agenthub.service` unit of ours owns the server, nothing else may stop it.** The bootstrap that performs a self-update is spawned by the running server, so it lives in that server's systemd cgroup: SIGTERM-ing the server from there exits 0 (which `Restart=on-failure` read as "meant to stop") AND trips `KillMode=control-group`, reaping the bootstrap before it can repoint the unit or write `state.json` — a dashboard dead after every update until some later session bootstrapped again. So `scripts/systemd-service.js` splits the API: `writeUserService` repoints the unit and starts NOTHING, `restartUserService` uses `--no-block`, and `plugin-bootstrap.js` defers that restart past `writeState` and `releaseLock` (`pendingSystemdRestart`). The unit is `Restart=always`. Do not add a path that stops the dashboard from inside its own cgroup, and do not move the restart earlier. `agenthub service install` may keep using `installUserService` — it runs from a user's shell, outside the cgroup. `systemdOwned` additionally requires the unit to be ACTIVE (an installed-but-stopped unit owns nothing; treating it as owner skips the stop and then binds an occupied port). A unit naming a RETIRED plugin root is invisible until a reboot, so `fastPathOk` rejects it via `unitIsStale` (pure fs — that path may never spawn a process) and the bootstrap rewrites it; repairing the unit is NOT restarting the server (`pendingSystemdRestart = systemdOwned && needsServer`), and the detached-spawn fallback is guarded by `needsServer` so a stale unit alone never starts a second server onto a bound port.
+- **A bootstrap that is no longer the installed build does NOTHING, and `--force` does not override that.** `supersededBy` (`scripts/plugin-bootstrap.js`) reads Claude Code's `installed_plugins.json`: if a SIBLING cache directory is the recorded install, this build logs one line and returns `superseded` — no deps, no unit, no server. A Claude Code process that was not restarted after an update keeps loading the OLD cache dir, and without this its every session repointed `agenthub.service` at that old dir and restarted the dashboard onto the version the user just upgraded away from, once per session, forever. It may not hand over to the new build either — the process it would replace is the one loading it. Do not add a path that lets a retired root write the unit, stop the server, or "just" refresh deps.
+- **Deleting retired cache copies is the ONE thing here that touches the plugin cache, and four protections gate it.** `pruneRetiredPluginRoots` never deletes: this build; any `installPath` in `installed_plugins.json`; the dir `agenthub.service` names (`unitRoot`, foreign unit included); any dir named in the user's `settings.json` hooks (a un-restarted Claude Code is still executing from there — deleting it breaks that session's hooks). Plus the 2 newest survivors as a rollback cushion, and nothing at all outside `~/.claude/plugins/cache/`. It runs AFTER `writeState`, so a bad prune cannot also cost the record of a good bootstrap. Adding a fifth thing that pins a cache dir means adding a fifth protection here.
 - **A session reload is typed into a live pane, never spawned.** `/reload-plugins` and `/reload-skills` are scoped BY CLAUDE CODE to the session that runs them, so nothing can reload a session from the outside. `server/lib/cc-reload.js` therefore types them into the dashboard's existing tmux lane panes and spawns NO `claude` process — a one-shot `claude -p "/reload-plugins"` reloads only its own short-lived session, exits, and leaves a junk session in the dashboard's own history. Do not add a path that starts a session in order to reload one.
 - Preserve existing behavior unless explicitly asked to change it.
 - Prefer minimal, reversible diffs.

client/src/components/lanes/AddLaneModal.tsx

@@ -475,22 +475,31 @@ export function AddLaneModal({
               ] as const
             ).map((option) => {
               const active = option.value === "native" ? router === "native" : router !== "native";
+              // Clicking "AI Router" before the list lands would resolve back to
+              // Native and read as a dead control.
+              const disabled = option.value === "router" && !routersLoaded;
               return (
                 <label
                   key={option.value}
-                  className={`flex flex-1 cursor-pointer items-center gap-2 rounded-lg border p-2.5 text-xs shadow-sm transition-colors ${
+                  // No radio dot: the card itself lights up when selected. That
-                    active
+                  // leaves the DISABLED state with nothing to show it, since the
-                      ? "border-accent bg-accent/10 text-accent"
+                  // greyed-out dot was carrying it — hence the explicit branch.
-                      : "border-border bg-surface-2 text-fg-secondary hover:border-border-light hover:bg-surface-3"
+                  // The input only goes visually hidden, so keyboard and screen
+                  // readers still get a real radio group, and the card carries
+                  // its focus ring.
+                  className={`block flex-1 rounded-lg border p-2.5 text-center text-xs shadow-sm transition-colors focus-within:ring-2 focus-within:ring-accent/50 ${
+                    disabled
+                      ? "cursor-not-allowed border-border bg-surface-2 text-fg-muted opacity-60"
+                      : active
+                        ? "cursor-pointer border-accent bg-accent/10 text-accent"
+                        : "cursor-pointer border-border bg-surface-2 text-fg-secondary hover:border-border-light hover:bg-surface-3"
                   }`}
                 >
                   <input
                     type="radio"
                     name="add-lane-router"
-                    className="h-3.5 w-3.5 accent-accent"
+                    className="sr-only"
-                    // Clicking "AI Router" before the list lands would resolve
+                    disabled={disabled}
-                    // back to Native and read as a dead control.
-                    disabled={option.value === "router" && !routersLoaded}
                     checked={active}
                     onChange={() =>
                       // Switching to "AI Router" lands on the first saved
@@ -536,9 +545,12 @@ export function AddLaneModal({
 
         {tool === "claude" && (
           <label
-            // Card that lights up when ticked, matching LaneStripCard's
+            // No tick box: the card itself lights up when selected, the same
-            // selected/unselected treatment.
+            // treatment LaneStripCard uses, which makes a second indicator of
-            className={`flex cursor-pointer items-start gap-2.5 rounded-lg border p-3 shadow-sm transition-colors ${
+            // the same state redundant. The input stays and only goes visually
+            // hidden — it is still what a keyboard toggles and what a screen
+            // reader announces — so the card carries the focus ring for it.
+            className={`block cursor-pointer rounded-lg border p-3 shadow-sm transition-colors focus-within:ring-2 focus-within:ring-accent/50 ${
               writeDocs
                 ? "border-accent bg-accent/10"
                 : "border-border bg-surface-2 hover:border-border-light hover:bg-surface-3"
@@ -551,17 +563,15 @@ export function AddLaneModal({
               aria-label={t("addLaneWriteDocsLabel")}
               checked={writeDocs}
               onChange={(e) => setWriteDocs(e.target.checked)}
-              className="mt-0.5 h-3.5 w-3.5 shrink-0 accent-accent"
+              className="sr-only"
             />
-            <span>
+            <span
-              <span
+              className={`block text-xs font-medium ${writeDocs ? "text-accent" : "text-fg-secondary"}`}
-                className={`block text-xs font-medium ${writeDocs ? "text-accent" : "text-fg-secondary"}`}
+            >
-              >
+              {t("addLaneWriteDocsLabel")}
-                {t("addLaneWriteDocsLabel")}
+            </span>
-              </span>
+            <span className="mt-1 block text-[10px] text-fg-muted">
-              <span className="mt-1 block text-[10px] text-fg-muted">
+              {t("addLaneWriteDocsHint")}
-                {t("addLaneWriteDocsHint")}
-              </span>
             </span>
           </label>
         )}

client/src/pages/__tests__/__snapshots__/screens.snapshot.test.tsx.snap

@@ -9537,7 +9537,7 @@ exports[`screen snapshots > Settings 1`] = `
             <p
               class="text-[10px] text-status-warning/90 mt-1"
             >
-              UI build v1.6.1 (rebuild client to match)
+              UI build v1.6.3 (rebuild client to match)
             </p>
           </div>
           <div

docs/PLUGINS.md

@@ -129,13 +129,14 @@ milliseconds — the real work happens in a detached worker, so a session never
 waits on an install:
 
 1. **Fast path** — recorded state matches this plugin build and a server is live → exit.
-2. **Node gate** — refuse below 22.5 with one line (see Prerequisites).
+2. **Superseded check** — if Claude Code records a DIFFERENT build of this plugin as installed, this one logs a line and does nothing else (see [A retired build never acts](#a-retired-build-never-acts)).
-3. **Lock** — atomic `mkdir` lock holding the PID; reclaimed when the owner is dead or the lock is older than 10 minutes, so two sessions cannot race the install or spawn two servers.
+3. **Node gate** — refuse below 22.5 with one line (see Prerequisites).
-4. **Install** — `npm install --omit=dev --ignore-scripts` into the runtime dir (never into the plugin cache, which is garbage-collected and replaced on every update). `--ignore-scripts` keeps the root `postinstall` from pulling the whole Vite client toolchain.
+4. **Lock** — atomic `mkdir` lock holding the PID; reclaimed when the owner is dead or the lock is older than 10 minutes, so two sessions cannot race the install or spawn two servers.
-5. **Legacy hook cleanup** — see above.
+5. **Install** — `npm install --omit=dev --ignore-scripts` into the runtime dir (never into the plugin cache, which is garbage-collected and replaced on every update). `--ignore-scripts` keeps the root `postinstall` from pulling the whole Vite client toolchain.
-6. **CLI** — write the `~/.local/bin/agenthub` launcher, never clobbering a `agenthub` the bootstrap did not write.
+6. **Legacy hook cleanup** — see above.
-7. **UI build** — `client/` is copied into the runtime dir and built there (`npm ci --include=dev`, falling back to `npm install --include=dev`, then `npm run build`), landing in `runtime/client-dist` — the same directory the server serves from. `--include=dev` is required, not tidy: the entire build toolchain (`vite`, `typescript`, `@vitejs/plugin-react`, `tailwindcss`, `@types/*`) is a devDependency, and npm reads an inherited `NODE_ENV=production` as `--omit=dev`. Every bootstrap descended from the running server carries that env — the self-update chain, and any `SessionStart` fired by a `claude` inside a tmux pane the server started — so without the flag the install drops `vite` and the build dies on missing types. Skipped when a bundle for the current version already exists; a failure here does not fail the bootstrap (the API still works, and `/agenthub-open` can retry) but does mean `/run` 404s until it's fixed — and when a bundle from the PREVIOUS version is still on disk the failure is quieter still: the dashboard keeps serving the old UI against the new API, visible only as the Settings page's `UI build vX (rebuild client to match)` line.
+7. **CLI** — write the `~/.local/bin/agenthub` launcher, never clobbering a `agenthub` the bootstrap did not write.
-8. **Server** — on Linux with `systemd --user` available, install/refresh a
+8. **UI build** — `client/` is copied into the runtime dir and built there (`npm ci --include=dev`, falling back to `npm install --include=dev`, then `npm run build`), landing in `runtime/client-dist` — the same directory the server serves from. `--include=dev` is required, not tidy: the entire build toolchain (`vite`, `typescript`, `@vitejs/plugin-react`, `tailwindcss`, `@types/*`) is a devDependency, and npm reads an inherited `NODE_ENV=production` as `--omit=dev`. Every bootstrap descended from the running server carries that env — the self-update chain, and any `SessionStart` fired by a `claude` inside a tmux pane the server started — so without the flag the install drops `vite` and the build dies on missing types. Skipped when a bundle for the current version already exists; a failure here does not fail the bootstrap (the API still works, and `/agenthub-open` can retry) but does mean `/run` 404s until it's fixed — and when a bundle from the PREVIOUS version is still on disk the failure is quieter still: the dashboard keeps serving the old UI against the new API, visible only as the Settings page's `UI build vX (rebuild client to match)` line.
+9. **Server** — on Linux with `systemd --user` available, install/refresh a
    `agenthub.service` unit (see [Auto-start on boot](#auto-start-on-boot)) instead
    of a bare spawn, so the server is supervised and comes back after a reboot
    with no Claude Code session involved. Everywhere else (macOS, Windows, or
@@ -143,10 +144,11 @@ waits on an install:
    runtime `node_modules` and `DASHBOARD_CLIENT_DIST` at the runtime
    `client-dist` — scoped to this session, same as before this fell back to
    systemd.
-9. **Record state** — `runtime/state.json`.
+10. **Record state** — `runtime/state.json`.
-10. **Hand over to systemd** — only when a unit of ours already owns the server
+11. **Prune retired cache copies** — delete the plugin-cache directories earlier updates left behind (see [Pruning the plugin cache](#pruning-the-plugin-cache)). After step 10, so a prune that goes wrong cannot also cost the record of a bootstrap that went right.
+12. **Hand over to systemd** — only when a unit of ours already owns the server
     (see [Who may stop the server](#who-may-stop-the-server)). Deliberately
-    after step 9.
+    after step 10.
 
 The first run takes a few minutes — most of it is the UI build, which is what
 makes client-only routes (`http://localhost:4820/run`, and every other page)
@@ -155,6 +157,66 @@ goes to `~/.claude/agenthub/runtime/bootstrap.log`; `npm run build`'s own
 output goes to `client-build.log` next to it; the server's own output goes to
 `server.log`.
 
+### A retired build never acts
+
+`claude plugin update` unpacks the new version into a **new** cache directory
+and prints "Restart to apply changes". A Claude Code process that was already
+running does not: it keeps loading the OLD directory — skills, commands and
+hooks included — until it is restarted.
+
+That used to be self-inflicting. Every session such a process opened ran the
+OLD `plugin-bootstrap.js`, which saw a `state.json` naming a different root,
+concluded the server had to be replaced, repointed `agenthub.service` at itself
+and restarted the dashboard onto the version the user had just upgraded away
+from. The dashboard then reported the old version and offered the update again
+— once per session, forever, while `installed_plugins.json` and the cache both
+said the new version was installed. A `/agenthub-update` from that session
+"succeeded" and changed nothing.
+
+So the bootstrap now asks first (`supersededBy`): if Claude Code's
+`~/.claude/plugins/installed_plugins.json` records a **sibling** directory as
+the installed build of this plugin, this build logs one line and returns
+`superseded` without touching dependencies, the unit, or the server. `--force`
+does not override it — the self-update chain runs `--force` from the NEW
+directory, which is never superseded, so the only `--force` this can refuse is
+one that would deliberately downgrade.
+
+It cannot hand over to the new build either: the process it would have to
+replace is the one loading it. Restarting Claude Code is the fix, and the log
+line says so.
+
+Matching is by sibling directory rather than by the `<plugin>@<marketplace>`
+key, which holds without parsing a cache path or trusting a name. An entry
+pointing at a directory that no longer exists is ignored — a phantom must never
+wedge a bootstrap shut.
+
+### Pruning the plugin cache
+
+Claude Code unpacks every update beside the last one and does not reliably
+remove the old. A machine that tracks releases closely accumulates a full copy
+of this repo — `node_modules` and all — per release; a dozen of them is
+gigabytes.
+
+Step 11 of the bootstrap (`pruneRetiredPluginRoots`) deletes them. This is the
+only place anything in the plugin touches the cache, and the rule it appears to
+break ("never write into the plugin cache") is about the *runtime* living
+outside it, not about keeping retired copies forever.
+
+Four independent readings of "still in use" are protected, and nothing matching
+any of them is ever deleted:
+
+| Protected | Why |
+|---|---|
+| This build | It is running. |
+| Every `installPath` in `installed_plugins.json`, at any scope | Claude Code says it is installed. |
+| The directory `agenthub.service` names (`unitRoot`, **foreign unit included**) | A service is executing from it. Not ours to rewrite is still not ours to delete. |
+| Any directory named in the user's `settings.json` hooks | A Claude Code process that has not been restarted is still executing from there — this is the same directory the section above describes, seen from the other side. Deleting it would break that session's hooks mid-flight. |
+
+Plus the newest `KEEP_RETIRED_ROOTS` (2) of whatever is left, as a rollback
+cushion. Outside `~/.claude/plugins/cache/` the pruner does nothing at all — for
+a git checkout the parent directory holds the user's own work. Best effort
+throughout: a directory that will not delete is left alone, never an error.
+
 ### Auto-start on boot
 
 On Linux, every plugin bootstrap (not just the first) installs/refreshes a

openapi.yaml

@@ -3,7 +3,7 @@
 openapi: 3.0.3
 info:
   title: Agent Dashboard for Claude Code API
-  version: 1.6.1
+  version: 1.6.3
   description: HTTP API for real-time Claude Code session monitoring, agent lifecycle tracking, analytics, pricing, hooks ingestion, and workflow intelligence.
   contact:
     name: Nguyễn Ngọc Trí Vĩ

package-lock.json

@@ -1,12 +1,12 @@
 {
   "name": "agenthub",
-  "version": "1.6.1",
+  "version": "1.6.3",
   "lockfileVersion": 3,
   "requires": true,
   "packages": {
     "": {
       "name": "agenthub",
-      "version": "1.6.1",
+      "version": "1.6.3",
       "hasInstallScript": true,
       "license": "UNLICENSED",
       "dependencies": {
@@ -1943,7 +1943,7 @@
       "license": "MIT"
     },
     "node_modules/path-expression-matcher": {
-      "version": "1.6.1",
+      "version": "1.6.3",
       "resolved": "https://registry.npmjs.org/path-expression-matcher/-/path-expression-matcher-1.6.1.tgz",
       "integrity": "sha512-h7bxdzhHk8Knyc4Tj+jMaa7fEEoUJy7p1qtbVgkYg1Uhpe5Np5VuGXCRZnkZvU+Q42M1vStt0ifa3ueykRJPmQ==",
       "funding": [

package.json

@@ -1,6 +1,6 @@
 {
   "name": "agenthub",
-  "version": "1.6.1",
+  "version": "1.6.3",
   "bin": {
     "agenthub": "bin/agenthub.js"
   },

scripts/plugin-bootstrap.js

@@ -14,8 +14,14 @@
  * scoped to this session, same as before.
  *
  * Everything writable lives under `~/.claude/agenthub/runtime/` — NOT in
- * the plugin cache, which Claude Code garbage-collects and replaces wholesale
+ * the plugin cache, which Claude Code replaces wholesale on every plugin
- * on every plugin update.
+ * update. The one thing this file does reach into the cache for is deleting
+ * the copies those updates leave behind (`pruneRetiredPluginRoots`).
+ *
+ * A bootstrap that is no longer the installed build does nothing at all
+ * (`supersededBy`): an old cache directory, still loaded by a Claude Code
+ * process that has not been restarted, would otherwise repoint systemd at
+ * itself and downgrade the dashboard once per session, forever.
  * @author Nguyễn Ngọc Trí Vĩ <vinnt@smartgift.vn>
  */
 
@@ -40,14 +46,65 @@ function runtimeDir() {
   return path.join(getDataDir(), "runtime");
 }
 
-function pluginVersion() {
+function pluginVersion(root = PLUGIN_ROOT) {
   try {
-    return require(path.join(PLUGIN_ROOT, "package.json")).version;
+    return require(path.join(root, "package.json")).version;
   } catch {
     return "unknown";
   }
 }
 
+/* -------------------------------------------------- superseded plugin build */
+
+/** Claude Code's own record of which build of each plugin is installed. */
+function installedPluginsPath() {
+  return path.join(getClaudeHome(), "plugins", "installed_plugins.json");
+}
+
+/**
+ * The build Claude Code has installed IN PLACE OF this one, or null when this
+ * build is the installed one (or when there is no such record to read).
+ *
+ * `claude plugin update` unpacks the new version into a new cache directory and
+ * says "Restart to apply changes" — but a Claude Code process that was already
+ * running keeps loading the OLD directory, hooks and all. Every session it
+ * opens from then on runs the OLD bootstrap, which happily repoints the systemd
+ * unit at itself and restarts the dashboard onto the version the user just
+ * upgraded away from. The dashboard then reports the old version and offers the
+ * update again — forever, once per session, until Claude Code is restarted.
+ *
+ * So a bootstrap that is no longer the installed build does NOTHING. It cannot
+ * hand over either: the process it would have to replace is the one loading it.
+ *
+ * Matched by SIBLING directory rather than by `<plugin>@<marketplace>` key: the
+ * builds of one plugin are exactly the directories beside this one, and that
+ * holds without parsing a cache path or trusting a name. An entry naming a
+ * directory that no longer exists is ignored — a phantom must never wedge a
+ * bootstrap shut.
+ */
+function supersededBy(root = PLUGIN_ROOT) {
+  let data;
+  try {
+    data = JSON.parse(fs.readFileSync(installedPluginsPath(), "utf8"));
+  } catch {
+    return null; // no record, unreadable, or not a plugin install at all
+  }
+  const siblings = path.dirname(root);
+  const found = [];
+  for (const entries of Object.values((data && data.plugins) || {})) {
+    for (const entry of entries || []) {
+      const installed =
+        entry && typeof entry.installPath === "string" ? path.resolve(entry.installPath) : null;
+      if (!installed) continue;
+      // This build IS installed (possibly at one scope among several) — the
+      // whole question is settled, whatever any other entry says.
+      if (installed === root) return null;
+      if (path.dirname(installed) === siblings && fs.existsSync(installed)) found.push(installed);
+    }
+  }
+  return found[0] || null;
+}
+
 /* ------------------------------------------------------------------ state */
 
 function statePath(rt = runtimeDir()) {
@@ -447,16 +504,133 @@ function autoInstallSkillPlugins(rt, { force = false } = {}) {
   }
 }
 
+/* ------------------------------------------------------ plugin-cache pruning */
+
+/** How many retired builds to leave behind, newest first, as a rollback cushion. */
+const KEEP_RETIRED_ROOTS = 2;
+
+/**
+ * Delete the cache directories earlier updates left behind.
+ *
+ * Claude Code unpacks every plugin update into a NEW directory beside the old
+ * one and does not reliably remove the old. A machine that tracks releases
+ * closely ends up with a dozen full copies of this repo — node_modules and all
+ * — which is what this clears.
+ *
+ * This is the one place anything here touches the plugin cache, and the file
+ * header's "never write into the cache" rule is about the RUNTIME living
+ * outside it, not about leaving retired copies forever. Everything still in use
+ * is protected, by four independent readings of "in use":
+ *
+ *  - this build;
+ *  - every build Claude Code records as installed, at any scope;
+ *  - the directory our systemd unit runs from, foreign unit included;
+ *  - any directory still named in the user's `settings.json` hooks — a Claude
+ *    Code process that has not been restarted is still executing from there,
+ *    and deleting it would break that session's hooks mid-flight. (This is
+ *    exactly the directory `supersededBy` describes, seen from the other side.)
+ *
+ * …plus the newest `KEEP_RETIRED_ROOTS` of whatever is left, so a rollback has
+ * something to roll back to. Best effort throughout: a directory that will not
+ * delete is left alone, never an error.
+ *
+ * @returns {number} how many directories were removed
+ */
+function pruneRetiredPluginRoots(rt, root = PLUGIN_ROOT) {
+  // Only inside Claude Code's plugin cache. For a git checkout the parent
+  // directory holds the user's own work and is never ours to delete from.
+  const cacheMarker = `${path.sep}plugins${path.sep}cache${path.sep}`;
+  if (!root.includes(cacheMarker)) return 0;
+  const cacheDir = path.dirname(root);
+
+  const keep = new Set([root]);
+  try {
+    const data = JSON.parse(fs.readFileSync(installedPluginsPath(), "utf8"));
+    for (const entries of Object.values((data && data.plugins) || {})) {
+      for (const entry of entries || []) {
+        if (entry && typeof entry.installPath === "string")
+          keep.add(path.resolve(entry.installPath));
+      }
+    }
+  } catch {
+    /* no record to read — the other three protections still apply */
+  }
+  try {
+    const unitRoot = require("./systemd-service").unitRoot("agenthub");
+    if (unitRoot) keep.add(path.resolve(unitRoot));
+  } catch {
+    /* best effort */
+  }
+  let settings = "";
+  try {
+    settings = fs.readFileSync(getSettingsPath(), "utf8");
+  } catch {
+    /* no settings file — nothing pinned by a hook */
+  }
+
+  let dirs;
+  try {
+    dirs = fs.readdirSync(cacheDir, { withFileTypes: true });
+  } catch {
+    return 0;
+  }
+
+  const retired = dirs
+    .filter((d) => d.isDirectory())
+    .map((d) => path.join(cacheDir, d.name))
+    .filter((dir) => !keep.has(dir) && !settings.includes(dir))
+    .map((dir) => {
+      let at = 0;
+      try {
+        at = fs.statSync(dir).mtimeMs;
+      } catch {
+        /* unreadable sorts oldest, so it goes first */
+      }
+      return { dir, at };
+    })
+    .sort((a, b) => b.at - a.at)
+    .slice(KEEP_RETIRED_ROOTS);
+
+  let removed = 0;
+  for (const { dir } of retired) {
+    try {
+      fs.rmSync(dir, { recursive: true, force: true });
+      removed += 1;
+    } catch {
+      /* in use, read-only, whatever — leaving it is always safe */
+    }
+  }
+  if (removed) {
+    log(rt, `removed ${removed} retired plugin cache ${removed === 1 ? "copy" : "copies"}`);
+  }
+  return removed;
+}
+
 /**
  * The real work. Runs detached from the SessionStart hook, so its only channel
  * is the log file; `/agenthub-update` runs it in the foreground with `force`, which
  * reinstalls dependencies and restarts the server unconditionally.
  *
- * @returns {"ok"|"locked"|"node-too-old"|"install-failed"}
+ * @returns {"ok"|"locked"|"node-too-old"|"install-failed"|"superseded"}
  */
 function bootstrap(rt = runtimeDir(), { force = false } = {}) {
   fs.mkdirSync(rt, { recursive: true });
 
+  // First, and ahead of the lock: a retired build has nothing to do and must
+  // not take the lock to discover it. `force` does NOT override this — the
+  // plugin-update chain runs `--force` from the NEW cache directory, which is
+  // never superseded, so the only `--force` this can refuse is one that would
+  // downgrade the user on purpose.
+  const newer = supersededBy();
+  if (newer) {
+    log(
+      rt,
+      `this build (${pluginVersion()}) has been replaced by ${pluginVersion(newer)} — doing nothing. ` +
+        `Restart Claude Code so it loads the new one; until then this session keeps running the old plugin.`
+    );
+    return "superseded";
+  }
+
   if (!nodeVersionOk()) {
     log(
       rt,
@@ -621,6 +795,10 @@ function bootstrap(rt = runtimeDir(), { force = false } = {}) {
       },
       rt
     );
+
+    // After the state is durable, so a prune that goes wrong cannot also cost
+    // us the record of a bootstrap that went right.
+    pruneRetiredPluginRoots(rt);
     return "ok";
   } finally {
     releaseLock(rt);
@@ -657,7 +835,14 @@ if (require.main === module) {
     // npm output and the result.
     const result = bootstrap(runtimeDir(), { force });
     if (force) {
-      console.log(result === "ok" ? "AgentHub runtime refreshed." : `bootstrap: ${result}`);
+      console.log(
+        result === "ok"
+          ? "AgentHub runtime refreshed."
+          : result === "superseded"
+            ? "A newer AgentHub plugin build is already installed — this one did nothing on purpose.\n" +
+              "Restart Claude Code so it loads the new build, then try again."
+            : `bootstrap: ${result}`
+      );
       if (result !== "ok") process.exitCode = 1;
     }
   } else {
@@ -672,6 +857,11 @@ if (require.main === module) {
 module.exports = {
   MIN_NODE,
   LOCK_STALE_MS,
+  KEEP_RETIRED_ROOTS,
+  supersededBy,
+  pruneRetiredPluginRoots,
+  installedPluginsPath,
+  pluginVersion,
   runtimeDir,
   statePath,
   readState,

scripts/systemd-service.js

@@ -85,6 +85,24 @@ function unitIsStale(name, root) {
   return !body.includes(`\nWorkingDirectory=${root}\n`);
 }
 
+/**
+ * The directory our unit actually runs from, or null when there is no unit.
+ *
+ * Deliberately does NOT require the marker: a FOREIGN unit named `agenthub` is
+ * not ours to rewrite, but whatever directory it runs from is still a directory
+ * nothing here may delete. The one caller is the plugin-cache pruner.
+ */
+function unitRoot(name) {
+  let body;
+  try {
+    body = fs.readFileSync(unitPath(name), "utf8");
+  } catch {
+    return null;
+  }
+  const match = body.match(/^WorkingDirectory=(.*)$/m);
+  return match ? match[1].trim() : null;
+}
+
 /** Is the unit currently running? Costs a `systemctl` call — never call it
  *  from the fast path. */
 function unitIsActive(name) {
@@ -209,6 +227,7 @@ module.exports = {
   systemctlAvailable,
   unitIsOurs,
   unitIsStale,
+  unitRoot,
   unitIsActive,
   writeUserService,
   restartUserService,

server/__tests__/plugin-bootstrap.test.js

@@ -488,3 +488,127 @@ describe("buildClient dependency install", () => {
     );
   });
 });
+
+describe("supersededBy — an old cache directory must not act", () => {
+  const pluginsDir = path.join(TMP_HOME, "plugins");
+  const cacheDir = path.join(pluginsDir, "cache", "sg", "agenthub");
+  const oldRoot = path.join(cacheDir, "aaaaaaaaaaaa");
+  const newRoot = path.join(cacheDir, "bbbbbbbbbbbb");
+
+  function writeInstalled(installPath) {
+    fs.mkdirSync(pluginsDir, { recursive: true });
+    fs.writeFileSync(
+      path.join(pluginsDir, "installed_plugins.json"),
+      JSON.stringify({
+        version: 2,
+        plugins: { "agenthub@sg": [{ scope: "user", installPath }] },
+      })
+    );
+  }
+
+  beforeEach(() => {
+    fs.rmSync(pluginsDir, { recursive: true, force: true });
+    fs.mkdirSync(oldRoot, { recursive: true });
+    fs.mkdirSync(newRoot, { recursive: true });
+  });
+
+  it("names the installed build when this one is not it", () => {
+    writeInstalled(newRoot);
+    assert.equal(boot.supersededBy(oldRoot), newRoot);
+  });
+
+  it("clears the build that IS installed", () => {
+    writeInstalled(newRoot);
+    assert.equal(boot.supersededBy(newRoot), null);
+  });
+
+  it("ignores an installed path that no longer exists", () => {
+    // A phantom entry must never wedge a bootstrap shut.
+    writeInstalled(path.join(cacheDir, "cccccccccccc"));
+    assert.equal(boot.supersededBy(oldRoot), null);
+  });
+
+  it("ignores a plugin that is not a sibling of this one", () => {
+    fs.mkdirSync(pluginsDir, { recursive: true });
+    const other = path.join(pluginsDir, "cache", "sg", "sg-all", "0.1.0");
+    fs.mkdirSync(other, { recursive: true });
+    fs.writeFileSync(
+      path.join(pluginsDir, "installed_plugins.json"),
+      JSON.stringify({ plugins: { "sg-all@sg": [{ installPath: other }] } })
+    );
+    assert.equal(boot.supersededBy(oldRoot), null);
+  });
+
+  it("says nothing when there is no record to read (a git checkout)", () => {
+    assert.equal(boot.supersededBy(oldRoot), null);
+  });
+});
+
+describe("pruneRetiredPluginRoots", () => {
+  const pluginsDir = path.join(TMP_HOME, "plugins");
+  const cacheDir = path.join(pluginsDir, "cache", "sg", "agenthub");
+  const settingsPath = path.join(TMP_HOME, "settings.json");
+
+  /** Six builds, oldest first, so mtime order is deterministic. */
+  function seed(names) {
+    fs.rmSync(pluginsDir, { recursive: true, force: true });
+    let t = Date.now() - names.length * 60_000;
+    for (const n of names) {
+      const dir = path.join(cacheDir, n);
+      fs.mkdirSync(dir, { recursive: true });
+      fs.utimesSync(dir, new Date(t), new Date(t));
+      t += 60_000;
+    }
+  }
+
+  const NAMES = ["v1", "v2", "v3", "v4", "v5", "current"];
+  const dir = (n) => path.join(cacheDir, n);
+
+  beforeEach(() => {
+    resetRuntime();
+    seed(NAMES);
+    fs.rmSync(settingsPath, { force: true });
+    fs.writeFileSync(path.join(pluginsDir, "installed_plugins.json"), "{}");
+  });
+
+  it("keeps the current build and the two newest retired ones", () => {
+    const removed = boot.pruneRetiredPluginRoots(RT, dir("current"));
+    assert.equal(removed, 3); // v1 v2 v3 go; v4 v5 are the cushion
+    assert.ok(fs.existsSync(dir("current")));
+    assert.ok(fs.existsSync(dir("v5")));
+    assert.ok(fs.existsSync(dir("v4")));
+    assert.ok(!fs.existsSync(dir("v1")));
+  });
+
+  it("never deletes a build Claude Code records as installed", () => {
+    fs.writeFileSync(
+      path.join(pluginsDir, "installed_plugins.json"),
+      JSON.stringify({ plugins: { "agenthub@sg": [{ installPath: dir("v1") }] } })
+    );
+    boot.pruneRetiredPluginRoots(RT, dir("current"));
+    assert.ok(fs.existsSync(dir("v1")));
+  });
+
+  it("never deletes a build the user's hooks still point at", () => {
+    // A Claude Code process that has not been restarted is still executing
+    // from there — deleting it breaks that session's hooks mid-flight.
+    fs.writeFileSync(
+      settingsPath,
+      JSON.stringify({
+        hooks: { SessionStart: [{ hooks: [{ command: `node "${dir("v2")}/scripts/x.js"` }] }] },
+      })
+    );
+    boot.pruneRetiredPluginRoots(RT, dir("current"));
+    assert.ok(fs.existsSync(dir("v2")));
+    assert.ok(!fs.existsSync(dir("v1")));
+  });
+
+  it("refuses to touch anything outside the plugin cache", () => {
+    const checkout = path.join(TMP_HOME, "checkout", "agenthub");
+    const sibling = path.join(TMP_HOME, "checkout", "something-precious");
+    fs.mkdirSync(checkout, { recursive: true });
+    fs.mkdirSync(sibling, { recursive: true });
+    assert.equal(boot.pruneRetiredPluginRoots(RT, checkout), 0);
+    assert.ok(fs.existsSync(sibling));
+  });
+});

server/__tests__/systemd-service.test.js

@@ -168,6 +168,25 @@ describe("systemd-service — unitIsStale", linuxOnly, () => {
   });
 });
 
+describe("systemd-service — unitRoot", linuxOnly, () => {
+  it("reports the directory the unit runs from", () => {
+    svc.writeUserService({ ...UNIT, workingDir: "/plugin/root/old" });
+    assert.equal(svc.unitRoot("agenthub"), "/plugin/root/old");
+  });
+
+  it("reports a FOREIGN unit's directory too", () => {
+    // Not ours to rewrite, but still a directory the cache pruner may not
+    // delete out from under a running service.
+    fs.mkdirSync(path.dirname(svc.unitPath("agenthub")), { recursive: true });
+    fs.writeFileSync(svc.unitPath("agenthub"), "[Service]\nWorkingDirectory=/opt/mine\n", "utf8");
+    assert.equal(svc.unitRoot("agenthub"), "/opt/mine");
+  });
+
+  it("is null when there is no unit", () => {
+    assert.equal(svc.unitRoot("agenthub"), null);
+  });
+});
+
 describe("systemd-service — unitIsActive", linuxOnly, () => {
   it("is true only for `active`", () => {
     svc.__setExecImpl((args) => ({ status: 0, stdout: args[0] === "is-active" ? "active\n" : "" }));